PDB-REDO is a fully automated procedure to optimise crystallographic structure models by refinement, rebuilding and extensive validation. It combines popular crystallographic software from CCP4, e.g. REFMAC and COOT, with with our specially developed rebuilding tools centrifuge, pepflip & SideAide and structure analysis tools like WHAT IF and PDB-care. All software is tied together in a pipeline with state-of-the-art decision-making algorithms to create the best optimisation protocol.
With PDB-REDO you can obtain updated and optimised versions of existing entries of the PDB from our data bank (left) or you can optimise your own structure models using our server (right). If you want to know more or install PDB-REDO on your own machine, please check below.