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| Importin alpha2 in complex with ORF4B Bat coronavirus HKU5 |
| This entry was created with PDB-REDO version 8.04 using the deposited PDB model version 1.2 |
| From original header | |||||
|---|---|---|---|---|---|
| Spacegroup | P 21 21 21 | a: 78.692Å b: 90.310Å c: 100.000Å | α: 90.00° β: 90.00° γ: 90.00° | ||
| Resolution | 2.10 Å | Reflections | 42043 | Test set | 2085 (5.0%) |
| R | 0.2050 | R-free | 0.2228 | ||
| According to PDB-REDO | |||||
| Resolution | 2.10 Å | Reflections | 42043 | Test set | 2085 (5.0%) |
| Twin | false | Radiation damage | N/A | ||
| PDB-REDO files | |||||
| Re-refined and rebuilt structure | Re-refined (only) structure |
All files
(compressed) |
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| Links | |||||
| PDBe | RCSB PDB | Proteopedia | |||
| Original | PDB-REDO | |
|---|---|---|
| Crystallographic refinement | ||
| R | 0.2113 | 0.1760 |
| R-free | 0.2298 | 0.2057 |
| Bond length RMS Z-score | 0.435 | 0.196 |
| Bond angle RMS Z-score | 0.665 | 0.407 |
| Model quality | ||
| Ramachandran plot normality | -0.385 71 | -0.428 70 |
| Rotamer normality | -1.362 71 | -0.471 86 |
| Coarse packing | 2.324 99 | 2.050 99 |
| Fine packing | 0.407 89 | 0.233 86 |
| Bump severity | 0.006 70 | 0.007 67 |
| Hydrogen bond satisfaction | 0.916 72 | 0.936 91 |
| WHAT_CHECK | Report | Report |
Kleywegt-like plot |
| Description | Count |
|---|---|
| Rotamers changed | 7 |
| Side chains built | 0 |
| Waters removed | 30 |
| Peptides flipped | 1 |
| Chiralities fixed | 0 |
| Residues fitting density better | 57 |
| Residues fitting density worse | 0 |