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| Importin alpha 2 in complex with MERS ORF4B NLS peptide |
| This entry was created with PDB-REDO version 8.04 using the deposited PDB model version 1.3 |
| From original header | |||||
|---|---|---|---|---|---|
| Spacegroup | P 21 21 21 | a: 78.510Å b: 89.530Å c: 100.060Å | α: 90.00° β: 90.00° γ: 90.00° | ||
| Resolution | 1.95 Å | Reflections | 52056 | Test set | 2645 (5.1%) |
| R | 0.1881 | R-free | 0.2114 | ||
| According to PDB-REDO | |||||
| Resolution | 1.95 Å | Reflections | 52056 | Test set | 2645 (5.1%) |
| Twin | false | Radiation damage | N/A | ||
| PDB-REDO files | |||||
| Re-refined and rebuilt structure | Re-refined (only) structure |
All files
(compressed) |
|||
| Links | |||||
| PDBe | RCSB PDB | Proteopedia | |||
| Original | PDB-REDO | |
|---|---|---|
| Crystallographic refinement | ||
| R | 0.1927 | 0.1742 |
| R-free | 0.2200 | 0.2081 |
| Bond length RMS Z-score | 0.460 | 0.563 |
| Bond angle RMS Z-score | 0.694 | 0.713 |
| Model quality | ||
| Ramachandran plot normality | 0.327 86 | -0.799 59 |
| Rotamer normality | -1.920 59 | -1.306 72 |
| Coarse packing | 2.345 99 | 2.100 99 |
| Fine packing | 0.301 87 | 0.070 84 |
| Bump severity | 0.005 74 | 0.006 70 |
| Hydrogen bond satisfaction | 0.929 86 | 0.942 94 |
| WHAT_CHECK | Report | Report |
Kleywegt-like plot |
| Description | Count |
|---|---|
| Rotamers changed | 5 |
| Side chains built | 0 |
| Waters removed | 11 |
| Peptides flipped | 0 |
| Chiralities fixed | 0 |
| Residues fitting density better | 33 |
| Residues fitting density worse | 0 |