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| Hendra virus W protein C-terminus in complex with Importin alpha 3 crystal form 1 |
| This entry was created with PDB-REDO version 8.08 using the deposited PDB model version 1.5 |
| From original header | |||||
|---|---|---|---|---|---|
| Spacegroup | P 1 21 1 | a: 47.430Å b: 65.740Å c: 74.190Å | α: 90.00° β: 99.76° γ: 90.00° | ||
| Resolution | 1.60 Å | Reflections | 58886 | Test set | 2894 (4.9%) |
| R | 0.1713 | R-free | 0.1963 | ||
| According to PDB-REDO | |||||
| Resolution | 1.60 Å | Reflections | 58886 | Test set | 2894 (4.9%) |
| Twin | false | Radiation damage | 91 | ||
| PDB-REDO files | |||||
| Re-refined and rebuilt structure | Re-refined (only) structure |
All files
(compressed) |
|||
| Links | |||||
| PDBe | RCSB PDB | Proteopedia | |||
| Original | PDB-REDO | |
|---|---|---|
| Crystallographic refinement | ||
| R | 0.1642 | 0.1585 |
| R-free | 0.1876 | 0.1862 |
| Bond length RMS Z-score | 0.935 | 0.316 |
| Bond angle RMS Z-score | 0.943 | 0.558 |
| Model quality | ||
| Ramachandran plot normality | -0.011 82 | 0.011 82 |
| Rotamer normality | -1.098 70 | -0.207 87 |
| Coarse packing | 2.267 98 | 2.165 98 |
| Fine packing | -0.451 72 | -0.441 73 |
| Bump severity | 0.004 76 | 0.004 76 |
| Hydrogen bond satisfaction | 0.949 97 | 0.949 97 |
| WHAT_CHECK | Report | Report |
Kleywegt-like plot |
| Description | Count |
|---|---|
| Rotamers changed | 8 |
| Side chains built | 0 |
| Waters removed | 19 |
| Peptides flipped | 0 |
| Chiralities fixed | 0 |
| Residues fitting density better | 2 |
| Residues fitting density worse | 0 |