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| In meso structure of alginate transporter, AlgE, from Pseudomoas aeruginosa, PAO1. Crystal form 3. |
| This entry was created with PDB-REDO version 8.04 using the deposited PDB model version 1.7 |
| From original header | |||||
|---|---|---|---|---|---|
| Spacegroup | P 21 21 21 | a: 61.672Å b: 77.463Å c: 240.290Å | α: 90.00° β: 90.00° γ: 90.00° | ||
| Resolution | 2.40 Å | Reflections | 45614 | Test set | 2300 (5.0%) |
| R | 0.2205 | R-free | 0.2436 | ||
| According to PDB-REDO | |||||
| Resolution | 2.40 Å | Reflections | 45614 | Test set | 2300 (5.0%) |
| Twin | false | Radiation damage | N/A | ||
| PDB-REDO files | |||||
| Re-refined and rebuilt structure | Re-refined (only) structure |
All files
(compressed) |
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| Links | |||||
| PDBe | RCSB PDB | Proteopedia | |||
| Original | PDB-REDO | |
|---|---|---|
| Crystallographic refinement | ||
| R | 0.2491 | 0.2029 |
| R-free | 0.2654 | 0.2446 |
| Bond length RMS Z-score | 1.307 | 0.709 |
| Bond angle RMS Z-score | 0.767 | 0.768 |
| Model quality | ||
| Ramachandran plot normality | -0.001 82 | -0.107 80 |
| Rotamer normality | -1.207 68 | -2.002 51 |
| Coarse packing | N/A N/A | N/A N/A |
| Fine packing | N/A N/A | N/A N/A |
| Bump severity | 0.000 95 | 0.000 95 |
| Hydrogen bond satisfaction | N/A N/A | N/A N/A |
Kleywegt-like plot |
| Description | Count |
|---|---|
| Rotamers changed | 20 |
| Side chains built | 0 |
| Waters removed | 14 |
| Peptides flipped | 0 |
| Chiralities fixed | 0 |
| Residues fitting density better | 52 |
| Residues fitting density worse | 0 |